Treponema denticola AL-2

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola AL-2 is a Gram-negative, anaerobic bacterium that belongs to the phylum Spirochaetes. It is characterized by its spiral shape (spirilla) and typically exists as single cells. T. denticola AL-2 is notable for its biotic relationship as a free-living organism, indicating it can thrive independently in its habitat, which is host-associated. This bacterium has a unique structure, possessing two membranes, which is characteristic of some Gram-negative bacteria. It has a single replicon, highlighting its simplicity in genomic organization. T. denticola AL-2 is mesophilic, with an optimal growth temperature of 30°C, although it can likely survive within a broader temperature range typical of mesophilic organisms. Interestingly, T. denticola AL-2 possesses flagella, which are often associated with motility. However, it is noted that this organism does not exhibit mobility, suggesting that it may rely on other means of movement or positioning within its environment. The ecological role of T. denticola AL-2 may be significant, particularly in its interactions within host-associated environments. Its ability to thrive as a free-living organism suggests it may play a role in microbial communities associated with hosts, potentially influencing host health or disease dynamics. Further studies could elucidate its specific interactions and contributions to the microbiome of its associated hosts. The accession number for this strain is NZ_CM001798.1.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainAL-2

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Treponema denticola AL-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema denticola AL-2 chromosome, whole genome shotgun

Gene Summary

Adenine Count

877552 bp

Thymine Count

878245 bp

Guanine Count

541573 bp

Cytosine Count

535579 bp

Genome Length

2843090 bp

Protein-coding Genes

2581 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zinc-dependent alcohol dehydrogenaseHMPREF9730_RS07875Not AvailablePositive1668909 - 166995537682.9
apc family permeaseHMPREF9730_RS07880Not AvailablePositive1669983 - 167132647763.6
riboflavin kinaseHMPREF9730_RS07885Not AvailablePositive1671400 - 167232334059.1
methyl-accepting chemotaxis proteinHMPREF9730_RS07890Not AvailableNegative1672373 - 167451179091.0
peptidase u32 family proteinHMPREF9730_RS07895Not AvailableNegative1674590 - 167683084084.0
rna polymerase sigma factor rpod/sigaHMPREF9730_RS07900Not AvailableNegative1676892 - 167771931743.3
kama family radical sam proteinHMPREF9730_RS07905Not AvailableNegative1677865 - 167888137787.7
m20 family metallo-hydrolaseHMPREF9730_RS07910Not AvailableNegative1678900 - 168013545316.1
crp/fnr family transcriptional regulatorHMPREF9730_RS07915Not AvailablePositive1680293 - 168154046965.5
hypothetical proteinHMPREF9730_RS07920Not AvailablePositive1681555 - 168214522921.6

Displaying genes 1661 – 1670 of 2685 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.