Treponema denticola AL-2

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola AL-2 is a Gram-negative, anaerobic bacterium that belongs to the phylum Spirochaetes. It is characterized by its spiral shape (spirilla) and typically exists as single cells. T. denticola AL-2 is notable for its biotic relationship as a free-living organism, indicating it can thrive independently in its habitat, which is host-associated. This bacterium has a unique structure, possessing two membranes, which is characteristic of some Gram-negative bacteria. It has a single replicon, highlighting its simplicity in genomic organization. T. denticola AL-2 is mesophilic, with an optimal growth temperature of 30°C, although it can likely survive within a broader temperature range typical of mesophilic organisms. Interestingly, T. denticola AL-2 possesses flagella, which are often associated with motility. However, it is noted that this organism does not exhibit mobility, suggesting that it may rely on other means of movement or positioning within its environment. The ecological role of T. denticola AL-2 may be significant, particularly in its interactions within host-associated environments. Its ability to thrive as a free-living organism suggests it may play a role in microbial communities associated with hosts, potentially influencing host health or disease dynamics. Further studies could elucidate its specific interactions and contributions to the microbiome of its associated hosts. The accession number for this strain is NZ_CM001798.1.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainAL-2

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Treponema denticola AL-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema denticola AL-2 chromosome, whole genome shotgun

Gene Summary

Adenine Count

877552 bp

Thymine Count

878245 bp

Guanine Count

541573 bp

Cytosine Count

535579 bp

Genome Length

2843090 bp

Protein-coding Genes

2581 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-argNot AvailableNot AvailablePositive1507426 - 1507499Not Available
Trna-pseudoNot AvailableNot AvailablePositive1507541 - 1507625Not Available
Trna-serNot AvailableNot AvailablePositive1507673 - 1507759Not Available
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive1507760 - 1507858Not Available
cyclic di-gmp binding proteinHMPREF9730_RS07215Not AvailablePositive1507908 - 150885234783.1
tetratricopeptide repeat proteinHMPREF9730_RS07220Not AvailablePositive1508897 - 151003943815.9
abc transporter substrate-binding proteinHMPREF9730_RS07225Not AvailablePositive1510122 - 151109935419.7
abc transporter permeaseHMPREF9730_RS07230Not AvailablePositive1511071 - 151180226971.2
Tmrna,resume consensus sequence (at 79): tataactgccgaaaataaNot AvailableNot AvailablePositive1511874 - 1512221Not Available
cob(i)yrinic acid a,c-diamide adenosyltransferaseHMPREF9730_RS07235Not AvailableNegative1512230 - 151274519311.4

Displaying genes 1521 – 1530 of 2685 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.