Pseudomonas chlororaphis subsp. aureofaciens 30-84

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis subsp. aureofaciens 30-84 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which is essential for its genetic stability and replication. The strain has been cataloged under the accession number NZ_CM001559.1. This subspecies is notable for its potential applications in agricultural settings, particularly as a biocontrol agent against plant pathogens. Its ability to produce antimicrobial compounds may contribute to its effectiveness in suppressing diseases in crops. The presence of a single replicon indicates a streamlined genome structure, which could facilitate efficient metabolic processes and adaptation to various environmental conditions. Understanding the traits of Pseudomonas chlororaphis subsp. aureofaciens 30-84 provides insight into its ecological role. As a member of the Pseudomonas genus, it is likely involved in nutrient cycling and may play a significant part in soil health. Its interactions with other microorganisms and plants can influence ecosystem dynamics, showcasing the importance of this bacterium beyond its agricultural utility.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainsubsp. aureofaciens 30-84

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis subsp. aureofaciens 30-84
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas chlororaphis subsp. aureofaciens 30-84 chromosome,

Gene Summary

Adenine Count

1236206 bp

Thymine Count

1233212 bp

Guanine Count

2092418 bp

Cytosine Count

2103185 bp

Genome Length

6666321 bp

Protein-coding Genes

5883 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s14PCHL3084_RS26990Not AvailableNegative6120623 - 612092811405.1
50s ribosomal protein l5PCHL3084_RS26995Not AvailableNegative6120942 - 612148120474.1
50s ribosomal protein l24PCHL3084_RS27000Not AvailableNegative6121502 - 612181611344.9
50s ribosomal protein l14PCHL3084_RS27005Not AvailableNegative6121828 - 612219613410.7
30s ribosomal protein s17PCHL3084_RS27010Not AvailableNegative6122220 - 612248610115.4
50s ribosomal protein l29PCHL3084_RS27015Not AvailableNegative6122489 - 61226807172.78
50s ribosomal protein l16PCHL3084_RS27020Not AvailableNegative6122680 - 612309315417.2
30s ribosomal protein s3PCHL3084_RS27025Not AvailableNegative6123106 - 612379225693.4
50s ribosomal protein l22PCHL3084_RS27030Not AvailableNegative6123806 - 612413811911.6
30s ribosomal protein s19PCHL3084_RS27035Not AvailableNegative6124152 - 612442710334.9

Displaying genes 5501 – 5510 of 6016 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.