Pseudomonas chlororaphis subsp. aureofaciens 30-84

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis subsp. aureofaciens 30-84 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which is essential for its genetic stability and replication. The strain has been cataloged under the accession number NZ_CM001559.1. This subspecies is notable for its potential applications in agricultural settings, particularly as a biocontrol agent against plant pathogens. Its ability to produce antimicrobial compounds may contribute to its effectiveness in suppressing diseases in crops. The presence of a single replicon indicates a streamlined genome structure, which could facilitate efficient metabolic processes and adaptation to various environmental conditions. Understanding the traits of Pseudomonas chlororaphis subsp. aureofaciens 30-84 provides insight into its ecological role. As a member of the Pseudomonas genus, it is likely involved in nutrient cycling and may play a significant part in soil health. Its interactions with other microorganisms and plants can influence ecosystem dynamics, showcasing the importance of this bacterium beyond its agricultural utility.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainsubsp. aureofaciens 30-84

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis subsp. aureofaciens 30-84
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas chlororaphis subsp. aureofaciens 30-84


Gene Summary

Adenine Count

1236206 bp

Thymine Count

1233212 bp

Guanine Count

2092418 bp

Cytosine Count

2103185 bp

Genome Length

6666321 bp

Protein-coding Genes

5883 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetylglucosamine-binding protein gbpaPCHL3084_RS25155Not AvailablePositive5737650 - 573914354518.8
cytochrome bPCHL3084_RS25160Not AvailablePositive5739207 - 573972819125.0
type ii secretion system protein nPCHL3084_RS25165Not AvailablePositive5739725 - 574027619872.0
type ii secretion system secretin gspdPCHL3084_RS25170Not AvailablePositive5740273 - 574217466480.0
type ii secretion system atpase gspePCHL3084_RS25175Not AvailablePositive5742171 - 574365554245.8
type ii secretion system inner membrane protein gspfPCHL3084_RS25180Not AvailablePositive5743658 - 574487243922.5
type ii secretion system major pseudopilin gspgPCHL3084_RS25185Not AvailablePositive5744885 - 574531915690.8
type ii secretion system minor pseudopilin gsphPCHL3084_RS25190Not AvailablePositive5745321 - 574580317948.9
type ii secretion system minor pseudopilin gspiPCHL3084_RS25195Not AvailablePositive5745787 - 574616113844.8
type ii secretion system minor pseudopilin gspjPCHL3084_RS25200Not AvailablePositive5746158 - 574676022650.5

Displaying genes 5131 – 5140 of 6016 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.