Pseudomonas lactis strain SS101

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas lactis strain SS101 is characterized by having a single replicon, which is significant for its genomic stability and replication efficiency. The strain is cataloged under the accession number NZ_CM001513.1, indicating its presence in genetic databases for further research and reference. The streamlined genomic structure of Pseudomonas lactis SS101 suggests it may possess unique adaptations that could be beneficial in various environments. As a member of the Pseudomonas genus, this strain is likely to exhibit metabolic versatility, which is a hallmark of many Pseudomonas species. This versatility could enable it to thrive in diverse ecological niches, potentially contributing to biogeochemical cycles or bioremediation processes. Understanding the specific traits of Pseudomonas lactis strain SS101, particularly its single replicon structure, can provide insights into its ecological role and potential applications. For instance, its genomic stability might be advantageous in industrial settings where consistent performance is required. Further study of this strain could reveal its interactions with microorganisms and the environment, highlighting its importance in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas lactis
Strainstrain SS101

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas lactis strain SS101
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas lactis strain SS101 chromosome, whole genome shotgun

Gene Summary

Adenine Count

1230661 bp

Thymine Count

1239702 bp

Guanine Count

1854237 bp

Cytosine Count

1854843 bp

Genome Length

6179543 bp

Protein-coding Genes

5432 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
quinone oxidoreductase family proteinPFLSS101_RS26235Not AvailableNegative23683 - 2466034164.7
oxygen-dependent coproporphyrinogen oxidasePFLSS101_RS26230Not AvailablePositive24839 - 2577135209.2
shikimate dehydrogenasePFLSS101_RS26225Not AvailablePositive25771 - 2658929107.9
sulp family inorganic anion transporterPFLSS101_RS26220Not AvailableNegative26720 - 2828856120.5
choline abc transporter substrate-binding proteinPFLSS101_RS26215Not AvailableNegative28444 - 2935833248.0
choline-sulfatasePFLSS101_RS26210Not AvailableNegative29377 - 3089157135.0
choline sulfate utilization transcriptional regulatorPFLSS101_RS26205Not AvailablePositive30995 - 3194535492.4
dopa 4,5-dioxygenase family proteinPFLSS101_RS26200Not AvailablePositive31976 - 3230212502.0
2-dehydro-3-deoxygalactonokinasePFLSS101_RS26195Not AvailablePositive32479 - 3343833900.0
2-dehydro-3-deoxy-6-phosphogalactonate aldolasePFLSS101_RS26190Not AvailablePositive33440 - 3406021260.0

Displaying genes 61 – 70 of 5550 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.