Pseudomonas lactis strain SS101

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas lactis strain SS101 is characterized by having a single replicon, which is significant for its genomic stability and replication efficiency. The strain is cataloged under the accession number NZ_CM001513.1, indicating its presence in genetic databases for further research and reference. The streamlined genomic structure of Pseudomonas lactis SS101 suggests it may possess unique adaptations that could be beneficial in various environments. As a member of the Pseudomonas genus, this strain is likely to exhibit metabolic versatility, which is a hallmark of many Pseudomonas species. This versatility could enable it to thrive in diverse ecological niches, potentially contributing to biogeochemical cycles or bioremediation processes. Understanding the specific traits of Pseudomonas lactis strain SS101, particularly its single replicon structure, can provide insights into its ecological role and potential applications. For instance, its genomic stability might be advantageous in industrial settings where consistent performance is required. Further study of this strain could reveal its interactions with microorganisms and the environment, highlighting its importance in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas lactis
Strainstrain SS101

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas lactis strain SS101
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas lactis strain SS101 chromosome, whole genome shotgun

Gene Summary

Adenine Count

1230661 bp

Thymine Count

1239702 bp

Guanine Count

1854237 bp

Cytosine Count

1854843 bp

Genome Length

6179543 bp

Protein-coding Genes

5432 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system membrane subunit tssmPFLSS101_RS00710Not AvailableNegative6002692 - 6006192128800.0
dotu family type vi secretion system proteinPFLSS101_RS00705Not AvailableNegative6006189 - 600747847094.7
type vi secretion system baseplate subunit tsskPFLSS101_RS00700Not AvailableNegative6007485 - 600881948717.3
type vi secretion system lipoprotein tssjPFLSS101_RS00695Not AvailableNegative6008838 - 600934718249.6
type vi secretion system-associated fha domain protein taghPFLSS101_RS00690Not AvailableNegative6009405 - 601073348566.6
type vi secretion system protein tssaPFLSS101_RS00685Not AvailablePositive6011127 - 601214636819.2
type vi secretion system contractile sheath small subunitPFLSS101_RS00680Not AvailablePositive6012201 - 601270718417.2
type vi secretion system contractile sheath large subunitPFLSS101_RS00675Not AvailablePositive6012710 - 601420655744.6
hcp family type vi secretion system effectorPFLSS101_RS00670Not AvailablePositive6014362 - 601485017519.9
type vi secretion system baseplate subunit tssePFLSS101_RS00665Not AvailablePositive6014923 - 601543818909.6

Displaying genes 5401 – 5410 of 5550 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.