Thermoanaerobacter siderophilus SR4

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Thermoanaerobacterales

Family

Thermoanaerobacteraceae

Genus

Thermoanaerobacter

Description

Thermoanaerobacter siderophilus SR4 is an anaerobic bacterium that thrives in environments devoid of oxygen. Its anaerobic nature suggests it relies on fermentation or other anaerobic metabolic processes for energy production. This organism possesses flagella, indicating that it is motile, which may assist in navigating its ecological niche and accessing nutrients. Genetically, Thermoanaerobacter siderophilus SR4 is characterized by having a single replicon, which indicates a streamlined genomic organization typical of many anaerobic bacteria. The genome of this species is documented under the accession number NZ_CM001486.1, providing a reference for researchers interested in its genetic makeup and potential applications. The ecological implications of Thermoanaerobacter siderophilus SR4 are significant, particularly in anaerobic environments where organic material is decomposed. Its ability to survive and thrive in the absence of oxygen plays a crucial role in biogeochemical cycles, particularly in the breakdown of complex organic substances. This bacterium may contribute to the recycling of nutrients in ecosystems such as sediments and anoxic waters. Understanding the metabolic pathways and ecological roles of such anaerobic microorganisms is essential for appreciating their functions in natural and engineered environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderThermoanaerobacterales
FamilyThermoanaerobacteraceae
GenusThermoanaerobacter
SpeciesThermoanaerobacter siderophilus
StrainSR4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermoanaerobacter siderophilus SR4 chromosome, whole genome

Gene Summary

Adenine Count

823590 bp

Thymine Count

845781 bp

Guanine Count

420398 bp

Cytosine Count

448290 bp

Genome Length

2540159 bp

Protein-coding Genes

2555 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinTHESIDRAFT1_RS14480Not AvailableNegative160578 - 1608058421.53
precorrin-4 c(11)-methyltransferaseTHESIDRAFT1_RS00840Not AvailableNegative160802 - 16150026123.7
precorrin-2 c(20)-methyltransferaseTHESIDRAFT1_RS00845Not AvailableNegative161560 - 16211120999.6
sirohydrochlorin chelataseTHESIDRAFT1_RS00850Not AvailableNegative162182 - 16246610648.0
adenosylcobinamide-gdp ribazoletransferaseTHESIDRAFT1_RS00855Not AvailableNegative162483 - 16323527669.1
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseTHESIDRAFT1_RS00860Not AvailableNegative163258 - 16381220602.3
threonine-phosphate decarboxylase cobdTHESIDRAFT1_RS00865Not AvailableNegative163812 - 16489741926.1
ribosome silencing factorTHESIDRAFT1_RS00870Not AvailableNegative164921 - 16565126109.1
ribosome silencing factorTHESIDRAFT1_RS00875Not AvailableNegative165655 - 16614117471.8
adenosylcobinamide-phosphate synthase cbibTHESIDRAFT1_RS00880Not AvailableNegative166138 - 16707634618.6

Displaying genes 171 – 180 of 2624 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0014079FuranC4H4OChemical structure of Furan110-00-9
Average68.074Da
Monoisotopic68.02621475Da
BASm0014084GlycogenC24H42O21Chemical structure of Glycogen9005-79-2
Average666.5777Da
Monoisotopic666.221858406Da
BASm0014085AmylopectinC30H52O26Chemical structure of Amylopectin9037-22-3
Average828.7183Da
Monoisotopic828.274681836Da
BASm0014086Amylose(C12H20O11)nC2H6Chemical structure of Amylose9005-82-7Not available

Displaying 1–8 of 8 metabolites

Health Effects

No health effects information available for this bacterium.