Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l34 | CALAB_RS20635 | Not Available | Positive | 1236101 - 1236259 | 6193.65 |
| ribonuclease p protein component | CALAB_RS04825 | Not Available | Positive | 1236237 - 1236569 | 13200.4 |
| membrane protein insertion efficiency factor yidd | CALAB_RS21860 | Not Available | Positive | 1236571 - 1236780 | 8129.06 |
| membrane protein insertase yidc | CALAB_RS04830 | Not Available | Positive | 1236802 - 1238619 | 70322.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CALAB_RS04835 | Not Available | Positive | 1238616 - 1239989 | 52197.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | CALAB_RS04840 | Not Available | Positive | 1240022 - 1241875 | 69061.0 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | CALAB_RS04845 | Not Available | Positive | 1241884 - 1242549 | 25881.9 |
| n-acetylmuramic acid 6-phosphate etherase | CALAB_RS04850 | Not Available | Positive | 1242542 - 1243477 | 34271.7 |
| cation:proton antiporter | CALAB_RS04855 | Not Available | Positive | 1243741 - 1244886 | 43417.8 |
| cation:proton antiporter | CALAB_RS04860 | Not Available | Positive | 1244883 - 1246169 | 47226.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
