Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS04775 | Not Available | Negative | 1223672 - 1224469 | 31086.8 |
| s-methyl-5-thioribose-1-phosphate isomerase | CALAB_RS04780 | Not Available | Positive | 1224550 - 1225602 | 38531.4 |
| tetratricopeptide repeat protein | CALAB_RS04785 | Not Available | Positive | 1225599 - 1226687 | 41449.1 |
| redox-sensing transcriptional repressor rex | CALAB_RS04790 | Not Available | Negative | 1226740 - 1227372 | 23220.1 |
| dna gyrase subunit a | CALAB_RS04795 | Not Available | Negative | 1227431 - 1229875 | 92103.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | CALAB_RS04800 | Not Available | Negative | 1229888 - 1231798 | 71661.7 |
| duf721 domain-containing protein | CALAB_RS04805 | Not Available | Negative | 1231807 - 1232094 | 11263.9 |
| dna replication/repair protein recf | CALAB_RS04810 | Not Available | Negative | 1232084 - 1233205 | 43359.9 |
| dna polymerase iii subunit beta | CALAB_RS04815 | Not Available | Negative | 1233192 - 1234313 | 43049.1 |
| dipeptidase | CALAB_RS04820 | Not Available | Negative | 1234443 - 1235645 | 45331.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
