Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mlad family protein | CALAB_RS04525 | Not Available | Positive | 1158833 - 1159717 | 32728.0 |
| Trna-phe | Not Available | Not Available | Positive | 1159778 - 1159850 | Not Available |
| type i restriction-modification system subunit m | CALAB_RS04535 | Not Available | Positive | 1160065 - 1162731 | 102987.0 |
| restriction endonuclease subunit s | CALAB_RS19760 | Not Available | Positive | 1162728 - 1163993 | 48219.7 |
| duf4433 domain-containing protein | CALAB_RS04545 | Not Available | Positive | 1163990 - 1164631 | 24999.1 |
| macro domain-containing protein | CALAB_RS04550 | Not Available | Positive | 1164641 - 1165663 | 38860.6 |
| type i restriction endonuclease subunit r | CALAB_RS04555 | Not Available | Positive | 1165740 - 1168877 | 121166.0 |
| m48 family metallopeptidase | CALAB_RS04560 | Not Available | Positive | 1168881 - 1169555 | 26329.7 |
| 4fe-4s binding protein | CALAB_RS04565 | Not Available | Negative | 1169839 - 1171380 | 58905.2 |
| duf362 domain-containing protein | CALAB_RS04570 | Not Available | Negative | 1171419 - 1172315 | 33472.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
