Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit chi | CALAB_RS04475 | Not Available | Positive | 1147450 - 1147908 | 17755.5 |
| uvrd-helicase domain-containing protein | CALAB_RS19755 | Not Available | Positive | 1147913 - 1150894 | 116739.0 |
| single-stranded-dna-specific exonuclease recj | CALAB_RS04485 | Not Available | Positive | 1151067 - 1152743 | 63100.2 |
| duf494 family protein | CALAB_RS04490 | Not Available | Positive | 1152845 - 1153315 | 18054.4 |
| type i dna topoisomerase | CALAB_RS04495 | Not Available | Positive | 1153380 - 1155614 | 85166.9 |
| tyrosine recombinase xerc | CALAB_RS04500 | Not Available | Positive | 1155625 - 1156545 | 35663.9 |
| ribosome hibernation-promoting factor, hpf/yfia family | CALAB_RS04505 | Not Available | Positive | 1156548 - 1156865 | 12628.5 |
| hpr(ser) kinase/phosphatase | CALAB_RS04510 | Not Available | Positive | 1156934 - 1157920 | 38006.5 |
| pts sugar transporter subunit iia | CALAB_RS04515 | Not Available | Positive | 1157917 - 1158303 | 14191.5 |
| pts system mannose/fructose/n-acetylgalactosamine-transporter subunit iib | CALAB_RS04520 | Not Available | Positive | 1158337 - 1158822 | 18405.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
