Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylglyoxal synthase | CALAB_RS04425 | Not Available | Negative | 1131300 - 1131737 | 16546.2 |
| spfh domain-containing protein | CALAB_RS04430 | Not Available | Positive | 1131919 - 1132881 | 36786.9 |
| pyridoxal phosphate-dependent aminotransferase | CALAB_RS04435 | Not Available | Positive | 1133063 - 1138633 | 214099.0 |
| aconitate hydratase | CALAB_RS04440 | Not Available | Negative | 1138722 - 1140989 | 83372.1 |
| tolb family protein | CALAB_RS04445 | Not Available | Negative | 1141692 - 1142756 | 40340.6 |
| peroxiredoxin | CALAB_RS04450 | Not Available | Negative | 1142822 - 1143430 | 22864.4 |
| dihydrolipoyl dehydrogenase | CALAB_RS04455 | Not Available | Negative | 1143637 - 1145028 | 50056.0 |
| hlyd family efflux transporter periplasmic adaptor subunit | CALAB_RS04460 | Not Available | Positive | 1145370 - 1146086 | 27139.2 |
| hypothetical protein | CALAB_RS04465 | Not Available | Positive | 1146132 - 1146533 | 15292.5 |
| hypothetical protein | CALAB_RS04470 | Not Available | Positive | 1146840 - 1147448 | 23268.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
