Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamg-like jellyroll fold domain-containing protein | CALAB_RS19555 | Not Available | Negative | 61602 - 64325 | 101711.0 |
| laci family dna-binding transcriptional regulator | CALAB_RS00215 | Not Available | Negative | 64466 - 65476 | 37726.2 |
| hypothetical protein | CALAB_RS00220 | Not Available | Positive | 66326 - 66763 | 16569.1 |
| t9ss type a sorting domain-containing protein | CALAB_RS19560 | Not Available | Negative | 66780 - 68531 | 63679.1 |
| t9ss type a sorting domain-containing protein | CALAB_RS00230 | Not Available | Negative | 68638 - 69192 | 21080.0 |
| is1182 family transposase | CALAB_RS00235 | Not Available | Negative | 69560 - 71146 | 61382.2 |
| crispr-associated endonuclease cas2 | CALAB_RS00240 | Not Available | Negative | 74556 - 74837 | 11375.4 |
| crispr-associated endonuclease cas2 | CALAB_RS00245 | Not Available | Negative | 74834 - 75109 | 10834.2 |
| crispr-associated endonuclease cas1 | CALAB_RS00250 | Not Available | Negative | 75106 - 76188 | 41734.6 |
| type iii-a crispr-associated ramp protein csm5 | CALAB_RS00255 | Not Available | Negative | 76220 - 77374 | 44635.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
