Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin b12-binding domain-containing protein | CALAB_RS04315 | Not Available | Negative | 1105813 - 1106217 | 14647.7 |
| methylmalonyl-coa mutase | CALAB_RS04320 | Not Available | Negative | 1106340 - 1108013 | 62986.3 |
| hypothetical protein | CALAB_RS04330 | Not Available | Positive | 1108360 - 1109379 | 38549.9 |
| gtpase hflx | CALAB_RS04335 | Not Available | Positive | 1109695 - 1110957 | 48330.4 |
| hypothetical protein | CALAB_RS04340 | Not Available | Positive | 1110962 - 1112518 | 60257.4 |
| mfs transporter | CALAB_RS04345 | Not Available | Positive | 1112646 - 1114238 | 58871.2 |
| tetratricopeptide repeat protein | CALAB_RS04350 | Not Available | Positive | 1114323 - 1116257 | 73452.4 |
| thioredoxin-dependent thiol peroxidase | CALAB_RS04355 | Not Available | Positive | 1116260 - 1116739 | 18122.7 |
| hypothetical protein | CALAB_RS04360 | Not Available | Positive | 1116968 - 1117165 | 7289.31 |
| had family hydrolase | CALAB_RS04365 | Not Available | Negative | 1117252 - 1117722 | 17446.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
