Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamg domain-containing protein | CALAB_RS04220 | Not Available | Positive | 1085554 - 1086336 | 29635.5 |
| csgg/hfab family protein | CALAB_RS04225 | Not Available | Positive | 1086862 - 1087815 | 35443.2 |
| wd40/yvtn/bnr-like repeat-containing protein | CALAB_RS04230 | Not Available | Positive | 1087964 - 1089232 | 48609.3 |
| hypothetical protein | CALAB_RS04235 | Not Available | Positive | 1089242 - 1089685 | 16830.6 |
| is1380 family transposase | CALAB_RS04240 | Not Available | Negative | 1089921 - 1091231 | 51540.4 |
| aaa family atpase | CALAB_RS20625 | Not Available | Negative | 1091578 - 1091817 | 8893.88 |
| is1634 family transposase | CALAB_RS04245 | Not Available | Positive | 1092049 - 1093845 | 70252.2 |
| mate family efflux transporter | CALAB_RS04250 | Not Available | Positive | 1094452 - 1095831 | 50053.5 |
| carboxymuconolactone decarboxylase family protein | CALAB_RS04255 | Not Available | Positive | 1095809 - 1096177 | 13934.0 |
| ectonucleotide pyrophosphatase/phosphodiesterase | CALAB_RS04260 | Not Available | Negative | 1096270 - 1097505 | 47316.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
