Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | CALAB_RS04170 | Not Available | Negative | 1070585 - 1071403 | 29867.3 |
| signal peptide peptidase sppa | CALAB_RS04175 | Not Available | Negative | 1071418 - 1073154 | 64607.3 |
| nupc/nupg family nucleoside cnt transporter | CALAB_RS04180 | Not Available | Negative | 1073168 - 1074493 | 47054.9 |
| thymidine kinase | CALAB_RS04185 | Not Available | Negative | 1074499 - 1075080 | 21925.6 |
| uridine kinase | CALAB_RS04190 | Not Available | Negative | 1075089 - 1075733 | 24305.6 |
| cytidine deaminase | CALAB_RS04195 | Not Available | Negative | 1075730 - 1076119 | 14145.9 |
| tandem-95 repeat protein | CALAB_RS19740 | Not Available | Negative | 1076496 - 1082132 | 205298.0 |
| hypothetical protein | CALAB_RS04205 | Not Available | Positive | 1082758 - 1084215 | 54763.2 |
| hypothetical protein | CALAB_RS04210 | Not Available | Positive | 1084241 - 1085008 | 30368.8 |
| flgd immunoglobulin-like domain containing protein | CALAB_RS04215 | Not Available | Positive | 1085052 - 1085516 | 17537.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
