Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS04115 | Not Available | Negative | 1054754 - 1055233 | 18554.2 |
| m16 family metallopeptidase | CALAB_RS04120 | Not Available | Negative | 1055249 - 1058095 | 109945.0 |
| prolyl oligopeptidase family serine peptidase | CALAB_RS04130 | Not Available | Positive | 1058285 - 1060363 | 79153.1 |
| nitrate reductase molybdenum cofactor assembly chaperone | CALAB_RS04135 | Not Available | Positive | 1060440 - 1061045 | 23622.9 |
| atp-dependent dna helicase | CALAB_RS04140 | Not Available | Positive | 1061049 - 1063463 | 93393.4 |
| phage holin family protein | CALAB_RS04145 | Not Available | Positive | 1063797 - 1064144 | 12504.9 |
| chase2 domain-containing protein | CALAB_RS04150 | Not Available | Negative | 1064154 - 1066304 | 81482.6 |
| hypothetical protein | CALAB_RS04155 | Not Available | Negative | 1066314 - 1068650 | 89268.7 |
| fecr domain-containing protein | CALAB_RS04160 | Not Available | Negative | 1068660 - 1069352 | 26076.9 |
| hypothetical protein | CALAB_RS04165 | Not Available | Negative | 1069366 - 1070496 | 43080.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
