Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'/3'-nucleotidase sure | CALAB_RS03910 | Not Available | Positive | 1009698 - 1010468 | 28247.1 |
| glutamine-hydrolyzing gmp synthase | CALAB_RS03915 | Not Available | Positive | 1010447 - 1012015 | 58676.9 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | CALAB_RS03920 | Not Available | Positive | 1012031 - 1013860 | 67669.0 |
| co-chaperone groes | CALAB_RS03925 | Not Available | Negative | 1013899 - 1014168 | 10074.2 |
| glutaredoxin family protein | CALAB_RS03930 | Not Available | Negative | 1014180 - 1014431 | 9390.69 |
| hypothetical protein | CALAB_RS03940 | Not Available | Negative | 1014934 - 1015341 | 15344.8 |
| is1182 family transposase | CALAB_RS03945 | Not Available | Negative | 1015576 - 1017162 | 61306.1 |
| undecaprenyl-diphosphate phosphatase | CALAB_RS03950 | Not Available | Positive | 1018324 - 1019130 | 29724.1 |
| sodium-dependent transporter | CALAB_RS03955 | Not Available | Positive | 1019143 - 1020603 | 54840.9 |
| dna polymerase iii subunit delta | CALAB_RS03960 | Not Available | Positive | 1020676 - 1021671 | 37847.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
