Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS03780 | Not Available | Negative | 990265 - 990516 | 9379.22 |
| hypothetical protein | CALAB_RS03785 | Not Available | Negative | 990509 - 991609 | 42774.3 |
| hypothetical protein | CALAB_RS03790 | Not Available | Negative | 991654 - 991866 | 8516.43 |
| hypothetical protein | CALAB_RS03795 | Not Available | Negative | 991933 - 992265 | 13612.4 |
| rna methyltransferase | CALAB_RS03880 | Not Available | Positive | 1004797 - 1005588 | 30582.3 |
| single-stranded dna-binding protein | CALAB_RS03885 | Not Available | Negative | 1006376 - 1006834 | 16793.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | CALAB_RS03890 | Not Available | Positive | 1007211 - 1007639 | 16652.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | CALAB_RS03895 | Not Available | Positive | 1007642 - 1008334 | 25899.7 |
| ribosomal protein s18-alanine n-acetyltransferase | CALAB_RS03900 | Not Available | Positive | 1008331 - 1008777 | 17675.4 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | CALAB_RS03905 | Not Available | Positive | 1008837 - 1009688 | 31609.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
