Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS03490 | Not Available | Negative | 912012 - 912503 | 18450.3 |
| hd domain-containing phosphohydrolase | CALAB_RS03495 | Not Available | Negative | 912641 - 914386 | 65725.5 |
| tetratricopeptide repeat protein | CALAB_RS03500 | Not Available | Negative | 914383 - 915531 | 44347.4 |
| gaf domain-containing protein | CALAB_RS03505 | Not Available | Negative | 915620 - 917227 | 62005.9 |
| sigma-54 interaction domain-containing protein | CALAB_RS03510 | Not Available | Negative | 917248 - 918561 | 50243.5 |
| peptidylprolyl isomerase | CALAB_RS03515 | Not Available | Negative | 918564 - 919844 | 49980.6 |
| peptidyl-prolyl cis-trans isomerase | CALAB_RS03520 | Not Available | Negative | 919862 - 920698 | 32714.7 |
| peptidylprolyl isomerase | CALAB_RS19715 | Not Available | Negative | 920695 - 922407 | 66604.3 |
| transcription-repair coupling factor | CALAB_RS03530 | Not Available | Negative | 922640 - 925960 | 127409.0 |
| tetratricopeptide repeat protein | CALAB_RS03535 | Not Available | Negative | 925970 - 926797 | 32641.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
