Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoamide acetyltransferase family protein | CALAB_RS03390 | Not Available | Negative | 868382 - 869632 | 45732.7 |
| thiamine pyrophosphate-dependent enzyme | CALAB_RS21855 | Not Available | Negative | 869815 - 871851 | 75569.2 |
| hypothetical protein | CALAB_RS03400 | Not Available | Negative | 871877 - 872071 | 7264.64 |
| duf1684 domain-containing protein | CALAB_RS03405 | Not Available | Negative | 872200 - 873114 | 34758.8 |
| hypothetical protein | CALAB_RS03410 | Not Available | Negative | 873294 - 874208 | 34228.2 |
| redoxin domain-containing protein | CALAB_RS20610 | Not Available | Positive | 874477 - 874641 | 6160.48 |
| flgd immunoglobulin-like domain containing protein | CALAB_RS03415 | Not Available | Positive | 874714 - 875250 | 20298.5 |
| hypothetical protein | CALAB_RS03420 | Not Available | Positive | 875247 - 875738 | 18886.9 |
| spy/cpxp family protein refolding chaperone | CALAB_RS03425 | Not Available | Positive | 876041 - 876526 | 18297.3 |
| formylglycine-generating enzyme family protein | CALAB_RS03430 | Not Available | Positive | 876667 - 877563 | 34063.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
