Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1182 family transposase | CALAB_RS03340 | Not Available | Negative | 857094 - 858680 | 61352.2 |
| hypothetical protein | CALAB_RS21250 | Not Available | Negative | 859824 - 859979 | 6140.2 |
| duf262 domain-containing protein | CALAB_RS03345 | Not Available | Negative | 859976 - 861946 | 74692.9 |
| restriction endonuclease subunit s | CALAB_RS03350 | Not Available | Negative | 862024 - 862467 | 16287.6 |
| fic family protein | CALAB_RS03355 | Not Available | Negative | 862692 - 863780 | 41370.9 |
| type i restriction-modification system subunit m | CALAB_RS03360 | Not Available | Negative | 863770 - 865368 | 60522.9 |
| Trna-ser | Not Available | Not Available | Positive | 866015 - 866097 | Not Available |
| trna dihydrouridine synthase dusb | CALAB_RS03375 | Not Available | Negative | 866480 - 867523 | 39140.0 |
| duf2203 domain-containing protein | CALAB_RS03380 | Not Available | Negative | 867593 - 867976 | 14894.9 |
| (2fe-2s) ferredoxin domain-containing protein | CALAB_RS03385 | Not Available | Negative | 868052 - 868366 | 11581.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
