Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family protein | CALAB_RS03280 | Not Available | Negative | 833494 - 834612 | 40594.2 |
| mfs transporter | CALAB_RS03285 | Not Available | Negative | 834641 - 835786 | 41174.6 |
| gh92 family glycosyl hydrolase | CALAB_RS03290 | Not Available | Negative | 835818 - 838121 | 87096.2 |
| gxgyxyp domain-containing protein | CALAB_RS03295 | Not Available | Negative | 838167 - 840122 | 74726.6 |
| gxgyxyp domain-containing protein | CALAB_RS03300 | Not Available | Negative | 840218 - 843544 | 126304.0 |
| flgd immunoglobulin-like domain containing protein | CALAB_RS03305 | Not Available | Negative | 843673 - 847455 | 141464.0 |
| porv/porq family protein | CALAB_RS03310 | Not Available | Negative | 847591 - 848598 | 37128.4 |
| hypothetical protein | CALAB_RS03315 | Not Available | Negative | 848652 - 851657 | 112497.0 |
| tonb-dependent receptor | CALAB_RS03320 | Not Available | Negative | 851856 - 854510 | 101148.0 |
| medium chain dehydrogenase/reductase family protein | CALAB_RS03335 | Not Available | Positive | 855785 - 856807 | 36969.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
