Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | CALAB_RS02990 | Not Available | Negative | 756996 - 757367 | 14168.5 |
| hypothetical protein | CALAB_RS21240 | Not Available | Negative | 757354 - 757518 | 6533.22 |
| type ii toxin-antitoxin system hicb family antitoxin | CALAB_RS02995 | Not Available | Negative | 757651 - 757866 | 8114.95 |
| type ii toxin-antitoxin system hica family toxin | CALAB_RS03000 | Not Available | Negative | 757863 - 758144 | 10963.4 |
| duf433 domain-containing protein | CALAB_RS03005 | Not Available | Negative | 758566 - 758799 | 8827.06 |
| duf5615 family pin-like protein | CALAB_RS03010 | Not Available | Negative | 758796 - 759164 | 14284.7 |
| type ii toxin-antitoxin system vapc family toxin | CALAB_RS03015 | Not Available | Negative | 759240 - 759680 | 16851.7 |
| hypothetical protein | CALAB_RS03020 | Not Available | Negative | 759655 - 759855 | 7763.66 |
| four helix bundle protein | CALAB_RS03025 | Not Available | Negative | 760739 - 761113 | 14425.3 |
| type vii toxin-antitoxin system hept family rnase toxin | CALAB_RS03030 | Not Available | Negative | 761326 - 761745 | 16278.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
