Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four helix bundle protein | CALAB_RS02840 | Not Available | Negative | 726329 - 726700 | 14577.5 |
| duf354 domain-containing protein | CALAB_RS02845 | Not Available | Negative | 726778 - 727848 | 42260.4 |
| lipid ii:glycine glycyltransferase femx | CALAB_RS02850 | Not Available | Negative | 727915 - 728925 | 39707.5 |
| glycosyltransferase family 4 protein | CALAB_RS02855 | Not Available | Negative | 728918 - 729862 | 35671.5 |
| atp-grasp domain-containing protein | CALAB_RS02860 | Not Available | Negative | 729859 - 730896 | 40913.7 |
| hypothetical protein | CALAB_RS02865 | Not Available | Negative | 730898 - 732619 | 68114.2 |
| capa family protein | CALAB_RS19675 | Not Available | Negative | 732623 - 733702 | 42026.3 |
| glycosyltransferase | CALAB_RS02875 | Not Available | Negative | 733994 - 735181 | 45980.3 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | CALAB_RS02880 | Not Available | Negative | 735178 - 736353 | 45414.3 |
| hypothetical protein | CALAB_RS02885 | Not Available | Negative | 736353 - 737267 | 36478.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
