Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nfact family protein | CALAB_RS00055 | Not Available | Positive | 10846 - 12513 | 64750.4 |
| tetratricopeptide repeat protein | CALAB_RS00060 | Not Available | Positive | 12527 - 13801 | 49812.1 |
| porv/porq family protein | CALAB_RS19545 | Not Available | Negative | 13778 - 14761 | 36235.6 |
| diacylglycerol/polyprenol kinase family protein | CALAB_RS00070 | Not Available | Negative | 14781 - 15359 | 21327.8 |
| ribulose-phosphate 3-epimerase | CALAB_RS00075 | Not Available | Negative | 15356 - 16027 | 24204.6 |
| pasta domain-containing protein | CALAB_RS19550 | Not Available | Negative | 16030 - 16800 | 29013.4 |
| d-aminoacyl-trna deacylase | CALAB_RS00085 | Not Available | Negative | 16920 - 17360 | 16180.8 |
| dna polymerase iii subunit alpha | CALAB_RS00090 | Not Available | Negative | 17357 - 20833 | 132485.0 |
| tetratricopeptide repeat protein | CALAB_RS00100 | Not Available | Negative | 21830 - 23191 | 51125.2 |
| tetratricopeptide repeat protein | CALAB_RS00105 | Not Available | Negative | 23201 - 26830 | 139955.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
