Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent transcriptional regulator | CALAB_RS02565 | Not Available | Negative | 642375 - 643715 | 50748.7 |
| creatininase family protein | CALAB_RS02570 | Not Available | Negative | 644108 - 644848 | 27427.4 |
| trna 5-hydroxyuridine modification protein yegq | CALAB_RS02575 | Not Available | Negative | 644872 - 646179 | 49659.7 |
| tolc family protein | CALAB_RS02580 | Not Available | Negative | 646678 - 648000 | 50360.7 |
| efflux rnd transporter permease subunit | CALAB_RS02585 | Not Available | Negative | 647997 - 651098 | 114342.0 |
| efflux rnd transporter periplasmic adaptor subunit | CALAB_RS02590 | Not Available | Negative | 651110 - 652138 | 38108.0 |
| tetr/acrr family transcriptional regulator | CALAB_RS02595 | Not Available | Negative | 652163 - 652801 | 25208.7 |
| response regulator | CALAB_RS02600 | Not Available | Positive | 653015 - 656851 | 145977.0 |
| ornithine--oxo-acid transaminase | CALAB_RS02610 | Not Available | Negative | 658138 - 659343 | 44448.7 |
| sdr family oxidoreductase | CALAB_RS02615 | Not Available | Negative | 659374 - 660090 | 25645.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
