Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| b12-binding domain-containing radical sam protein | CALAB_RS02455 | Not Available | Negative | 617159 - 618571 | 54511.8 |
| tetratricopeptide repeat protein | CALAB_RS02460 | Not Available | Negative | 618614 - 619816 | 47115.6 |
| cupin domain-containing protein | CALAB_RS02465 | Not Available | Positive | 620468 - 620986 | 19872.7 |
| giy-yig nuclease family protein | CALAB_RS02470 | Not Available | Positive | 620983 - 621345 | 13750.8 |
| tonb-dependent receptor | CALAB_RS02480 | Not Available | Positive | 621918 - 624137 | 83425.2 |
| amidohydrolase | CALAB_RS02490 | Not Available | Negative | 624528 - 625337 | 31145.3 |
| methionine aminotransferase | CALAB_RS02495 | Not Available | Negative | 625325 - 626476 | 43590.0 |
| hypothetical protein | CALAB_RS02500 | Not Available | Negative | 626473 - 626919 | 16741.1 |
| lipoyl synthase | CALAB_RS02505 | Not Available | Positive | 627118 - 628065 | 36330.8 |
| is1634 family transposase | CALAB_RS02510 | Not Available | Negative | 628252 - 629901 | 64178.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
