Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase slt domain-containing protein | CALAB_RS19665 | Not Available | Negative | 604728 - 606959 | 89289.0 |
| m28 family peptidase | CALAB_RS02410 | Not Available | Negative | 607212 - 608618 | 52367.4 |
| hypothetical protein | CALAB_RS02415 | Not Available | Negative | 608619 - 609215 | 23214.3 |
| two-component system histidine kinase pnps | CALAB_RS02420 | Not Available | Negative | 609394 - 611175 | 67731.1 |
| response regulator | CALAB_RS02425 | Not Available | Negative | 611172 - 611864 | 26087.0 |
| hypothetical protein | CALAB_RS02430 | Not Available | Negative | 611947 - 612459 | 19984.4 |
| duf4388 domain-containing protein | CALAB_RS02435 | Not Available | Negative | 612456 - 613571 | 43629.4 |
| duf4388 domain-containing protein | CALAB_RS02440 | Not Available | Negative | 613568 - 615130 | 60070.4 |
| rna methyltransferase | CALAB_RS02445 | Not Available | Negative | 615164 - 615748 | 22271.9 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | CALAB_RS02450 | Not Available | Negative | 615759 - 617162 | 53442.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
