Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS02355 | Not Available | Positive | 593723 - 594775 | 41560.7 |
| hypothetical protein | CALAB_RS02360 | Not Available | Positive | 594777 - 595796 | 39511.2 |
| phosphomannomutase/phosphoglucomutase | CALAB_RS02365 | Not Available | Positive | 595833 - 597197 | 51125.5 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | CALAB_RS02370 | Not Available | Negative | 597673 - 598407 | 27973.6 |
| ubix family flavin prenyltransferase | CALAB_RS02375 | Not Available | Negative | 598400 - 599005 | 22108.8 |
| ubia-like polyprenyltransferase | CALAB_RS02380 | Not Available | Negative | 599002 - 599874 | 32534.6 |
| amidohydrolase family protein | CALAB_RS02385 | Not Available | Negative | 599865 - 601058 | 44349.6 |
| cyclic dehypoxanthinyl futalosine synthase | CALAB_RS02390 | Not Available | Negative | 601060 - 602127 | 40798.8 |
| menaquinone biosynthetic enzyme mqna/mqnd family protein | CALAB_RS19660 | Not Available | Negative | 602114 - 602983 | 32825.3 |
| aminofutalosine synthase mqne | CALAB_RS02400 | Not Available | Negative | 602997 - 604100 | 41790.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
