Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS19655 | Not Available | Negative | 583872 - 584333 | 18133.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | CALAB_RS02310 | Not Available | Positive | 584466 - 585551 | 39912.2 |
| dead/deah box helicase | CALAB_RS02320 | Not Available | Positive | 586542 - 588125 | 59569.1 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 588575 - 588674 | Not Available |
| dna polymerase iii subunit gamma/tau | CALAB_RS02325 | Not Available | Positive | 588711 - 590279 | 59134.1 |
| ybab/ebfc family nucleoid-associated protein | CALAB_RS02330 | Not Available | Positive | 590292 - 590630 | 12257.1 |
| recombination mediator recr | CALAB_RS02335 | Not Available | Positive | 590633 - 591247 | 22523.5 |
| mbl fold metallo-hydrolase | CALAB_RS02340 | Not Available | Negative | 591680 - 592588 | 34658.2 |
| bifunctional nuclease family protein | CALAB_RS02345 | Not Available | Negative | 592613 - 593188 | 21505.7 |
| nifu family protein | CALAB_RS02350 | Not Available | Negative | 593219 - 593440 | 8030.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
