Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation protease | CALAB_RS02150 | Not Available | Positive | 541988 - 542455 | 16852.5 |
| response regulator transcription factor | CALAB_RS02155 | Not Available | Positive | 542430 - 542816 | 14592.7 |
| sensor histidine kinase | CALAB_RS02165 | Not Available | Positive | 543113 - 544465 | 51494.7 |
| act domain-containing protein | CALAB_RS02170 | Not Available | Positive | 544483 - 544947 | 17194.9 |
| pas domain-containing sensor histidine kinase | CALAB_RS19645 | Not Available | Negative | 544967 - 547747 | 106152.0 |
| choice-of-anchor d domain-containing protein | CALAB_RS02180 | Not Available | Negative | 547803 - 552974 | 188811.0 |
| hypothetical protein | CALAB_RS02185 | Not Available | Negative | 552991 - 553521 | 19996.2 |
| serine/threonine-protein kinase | CALAB_RS19650 | Not Available | Negative | 553659 - 555986 | 87602.3 |
| adp-glyceromanno-heptose 6-epimerase | CALAB_RS02195 | Not Available | Negative | 556171 - 557133 | 37103.3 |
| is1182 family transposase | CALAB_RS02200 | Not Available | Positive | 557598 - 558881 | 49796.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
