Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase family protein | CALAB_RS02100 | Not Available | Positive | 526088 - 526807 | 27820.5 |
| tonb-dependent receptor domain-containing protein | CALAB_RS02105 | Not Available | Negative | 527125 - 529575 | 94397.4 |
| is110 family transposase | CALAB_RS02110 | Not Available | Positive | 530035 - 531102 | 41528.9 |
| t9ss type a sorting domain-containing protein | CALAB_RS02115 | Not Available | Positive | 532862 - 535120 | 82967.0 |
| is1634 family transposase | CALAB_RS21605 | Not Available | Negative | 535401 - 536270 | 34144.9 |
| is1634 family transposase | CALAB_RS21610 | Not Available | Negative | 536230 - 537063 | 32289.2 |
| 4fe-4s dicluster domain-containing protein | CALAB_RS02130 | Not Available | Positive | 538000 - 539058 | 41123.3 |
| fad/nad(p)-binding protein | CALAB_RS02135 | Not Available | Positive | 539074 - 539913 | 31388.2 |
| nadh ubiquinone oxidoreductase | CALAB_RS02140 | Not Available | Positive | 539910 - 540686 | 29216.2 |
| ni/fe hydrogenase subunit alpha | CALAB_RS02145 | Not Available | Positive | 540683 - 541987 | 48478.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
