Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss type a sorting domain-containing protein | CALAB_RS19635 | Not Available | Positive | 461980 - 463419 | 53985.4 |
| hypothetical protein | CALAB_RS21225 | Not Available | Positive | 463851 - 463997 | 4863.77 |
| dihydroorotate dehydrogenase electron transfer subunit | CALAB_RS01815 | Not Available | Negative | 464024 - 464818 | 29094.3 |
| dihydroorotate dehydrogenase | CALAB_RS01820 | Not Available | Negative | 464811 - 465728 | 32472.4 |
| aspartate carbamoyltransferase regulatory subunit | CALAB_RS01825 | Not Available | Negative | 465737 - 466216 | 18053.6 |
| aspartate carbamoyltransferase | CALAB_RS01830 | Not Available | Negative | 466213 - 467133 | 34709.1 |
| orotidine 5'-phosphate decarboxylase / humps family protein | CALAB_RS01835 | Not Available | Negative | 467308 - 467994 | 25296.6 |
| orotate phosphoribosyltransferase | CALAB_RS01840 | Not Available | Negative | 467998 - 468642 | 24283.2 |
| dihydroorotase | CALAB_RS01845 | Not Available | Negative | 468617 - 469891 | 48426.4 |
| duf559 domain-containing protein | CALAB_RS21925 | Not Available | Negative | 470144 - 470311 | 6558.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
