Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | CALAB_RS01705 | Not Available | Positive | 438542 - 439999 | 55504.2 |
| hlyd family secretion protein | CALAB_RS01710 | Not Available | Positive | 440015 - 441004 | 37185.1 |
| abc transporter permease | CALAB_RS01715 | Not Available | Positive | 441021 - 442214 | 44694.8 |
| abc transporter permease | CALAB_RS01720 | Not Available | Positive | 442211 - 443398 | 44958.2 |
| isl3 family transposase | CALAB_RS01730 | Not Available | Negative | 443812 - 445044 | 48263.5 |
| is1182 family transposase | CALAB_RS01735 | Not Available | Negative | 445054 - 446637 | 61733.0 |
| hypothetical protein | CALAB_RS01740 | Not Available | Negative | 446999 - 447271 | 10518.8 |
| hal/pal/tal family ammonia-lyase | CALAB_RS01745 | Not Available | Positive | 447595 - 449118 | 55160.2 |
| m48 family metallopeptidase | CALAB_RS01750 | Not Available | Negative | 449260 - 450393 | 43787.8 |
| lysine biosynthesis protein lysw | CALAB_RS01755 | Not Available | Positive | 450851 - 451027 | 6400.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
