Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss type a sorting domain-containing protein | CALAB_RS20535 | Not Available | Negative | 4908121 - 4909803 | 63471.9 |
| hypothetical protein | CALAB_RS19355 | Not Available | Negative | 4910652 - 4911236 | 22586.3 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | CALAB_RS19360 | Not Available | Positive | 4911469 - 4912758 | 48775.1 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | CALAB_RS19365 | Not Available | Positive | 4912755 - 4914059 | 49949.9 |
| mbl fold metallo-hydrolase rna specificity domain-containing protein | CALAB_RS19370 | Not Available | Positive | 4914052 - 4915032 | 37728.2 |
| triose-phosphate isomerase | CALAB_RS19380 | Not Available | Negative | 4915653 - 4916420 | 27977.8 |
| phosphoglycerate kinase | CALAB_RS19385 | Not Available | Negative | 4916831 - 4918027 | 43398.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | CALAB_RS19390 | Not Available | Negative | 4918097 - 4919098 | 36211.9 |
| 5'-deoxyadenosine deaminase | CALAB_RS19395 | Not Available | Positive | 4919273 - 4920565 | 47631.7 |
| tetratricopeptide repeat protein | CALAB_RS19400 | Not Available | Positive | 4920640 - 4921446 | 30811.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
