Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| csgg/hfab family protein | CALAB_RS21195 | Not Available | Negative | 4892667 - 4893821 | 42853.4 |
| right-handed parallel beta-helix repeat-containing protein | CALAB_RS19305 | Not Available | Positive | 4894036 - 4895670 | 60411.6 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | CALAB_RS19310 | Not Available | Positive | 4895828 - 4897306 | 54213.5 |
| stas domain-containing protein | CALAB_RS19315 | Not Available | Positive | 4897341 - 4897685 | 12984.5 |
| peptide mfs transporter | CALAB_RS19320 | Not Available | Negative | 4897759 - 4899042 | 47686.9 |
| yran family protein | CALAB_RS19325 | Not Available | Negative | 4899660 - 4900040 | 14746.6 |
| bifunctional metallophosphatase/5'-nucleotidase | CALAB_RS19330 | Not Available | Positive | 4900121 - 4901818 | 64057.0 |
| s9 family peptidase | CALAB_RS19335 | Not Available | Negative | 4902263 - 4904371 | 81431.4 |
| duf3857 domain-containing protein | CALAB_RS19340 | Not Available | Positive | 4904697 - 4906652 | 75008.8 |
| nad(p)-dependent oxidoreductase | CALAB_RS19345 | Not Available | Positive | 4907016 - 4907996 | 36657.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
