Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dna ligase liga | CALAB_RS19245 | Not Available | Positive | 4878378 - 4880384 | 75371.8 |
| rna recognition motif domain-containing protein | CALAB_RS19250 | Not Available | Positive | 4880615 - 4880914 | 11314.0 |
| protein kinase domain-containing protein | CALAB_RS19255 | Not Available | Positive | 4881103 - 4882818 | 64993.9 |
| nhl repeat-containing protein | CALAB_RS19260 | Not Available | Positive | 4882835 - 4883749 | 34664.4 |
| hypothetical protein | CALAB_RS19265 | Not Available | Positive | 4883746 - 4887369 | 140352.0 |
| atp-binding protein | CALAB_RS19270 | Not Available | Positive | 4887554 - 4888897 | 50705.6 |
| response regulator | CALAB_RS19275 | Not Available | Positive | 4888899 - 4889372 | 18329.1 |
| methylated-dna--[protein]-cysteine s-methyltransferase | CALAB_RS19280 | Not Available | Positive | 4889379 - 4889837 | 17351.0 |
| lpp20 family lipoprotein | CALAB_RS19290 | Not Available | Negative | 4890320 - 4891672 | 50683.3 |
| outer membrane beta-barrel protein | CALAB_RS19295 | Not Available | Negative | 4891805 - 4892437 | 23156.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
