Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | CALAB_RS19100 | Not Available | Negative | 4841962 - 4843014 | 39769.5 |
| uroporphyrinogen-iii synthase | CALAB_RS19105 | Not Available | Negative | 4843001 - 4843792 | 29233.6 |
| hydroxymethylbilane synthase | CALAB_RS19110 | Not Available | Negative | 4843776 - 4844717 | 34860.7 |
| glutamyl-trna reductase | CALAB_RS19115 | Not Available | Negative | 4844727 - 4846004 | 49102.8 |
| inner membrane protein ypjd | CALAB_RS19120 | Not Available | Negative | 4846019 - 4846843 | 31567.5 |
| class i sam-dependent methyltransferase | CALAB_RS19125 | Not Available | Negative | 4846965 - 4847699 | 28337.0 |
| 30s ribosomal protein s21 | CALAB_RS19130 | Not Available | Negative | 4848081 - 4848260 | 7093.83 |
| methionyl-trna formyltransferase | CALAB_RS19135 | Not Available | Negative | 4848346 - 4849275 | 34206.9 |
| preprotein translocase subunit yajc | CALAB_RS19140 | Not Available | Negative | 4849275 - 4849610 | 12141.3 |
| trna guanosine(34) transglycosylase tgt | CALAB_RS19145 | Not Available | Negative | 4849627 - 4850760 | 43110.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
