Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CALAB_RS21190 | Not Available | Positive | 4829412 - 4829624 | 7927.36 |
| wg repeat-containing protein | CALAB_RS19055 | Not Available | Negative | 4829807 - 4830814 | 37710.4 |
| glycoside hydrolase family 47 protein | CALAB_RS19060 | Not Available | Negative | 4831095 - 4832471 | 52875.3 |
| rok family protein | CALAB_RS19065 | Not Available | Negative | 4832537 - 4833496 | 34162.3 |
| peptidylprolyl isomerase | CALAB_RS20520 | Not Available | Negative | 4833870 - 4835300 | 56607.7 |
| glutamate-1-semialdehyde 2,1-aminomutase | CALAB_RS19075 | Not Available | Negative | 4835489 - 4836772 | 46179.4 |
| porphobilinogen synthase | CALAB_RS19080 | Not Available | Negative | 4836806 - 4837783 | 36354.5 |
| protoporphyrinogen oxidase | CALAB_RS19085 | Not Available | Negative | 4837793 - 4839154 | 50657.5 |
| ferrochelatase | CALAB_RS19090 | Not Available | Negative | 4839220 - 4840227 | 38587.0 |
| oxygen-independent coproporphyrinogen iii oxidase | CALAB_RS19095 | Not Available | Negative | 4840244 - 4841638 | 54089.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
