Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | CALAB_RS19010 | Not Available | Negative | 4819295 - 4821673 | 89744.9 |
| phenylalanine--trna ligase subunit alpha | CALAB_RS19015 | Not Available | Negative | 4821685 - 4822692 | 38154.1 |
| 50s ribosomal protein l20 | CALAB_RS19020 | Not Available | Negative | 4822780 - 4823127 | 13251.4 |
| 50s ribosomal protein l35 | CALAB_RS19025 | Not Available | Negative | 4823155 - 4823349 | 7528.48 |
| translation initiation factor if-3 | CALAB_RS19030 | Not Available | Negative | 4823365 - 4823871 | 19534.0 |
| threonine--trna ligase | CALAB_RS19035 | Not Available | Negative | 4823905 - 4825824 | 74184.2 |
| Trna-val | Not Available | Not Available | Positive | 4825883 - 4825959 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 4826064 - 4826147 | Not Available |
| hypothetical protein | CALAB_RS21425 | Not Available | Negative | 4826363 - 4826518 | 6068.89 |
| lon protease family protein | CALAB_RS19050 | Not Available | Positive | 4826823 - 4829246 | 92033.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
