Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| opt family oligopeptide transporter | CALAB_RS18960 | Not Available | Positive | 4810148 - 4812145 | 70508.4 |
| pqqd family protein | CALAB_RS18965 | Not Available | Positive | 4812335 - 4812703 | 14720.7 |
| selenide, water dikinase seld | CALAB_RS18970 | Not Available | Negative | 4812684 - 4813742 | 38250.3 |
| duf58 domain-containing protein | CALAB_RS18975 | Not Available | Negative | 4813745 - 4814644 | 35145.6 |
| hypothetical protein | CALAB_RS18980 | Not Available | Negative | 4814799 - 4815122 | 12828.1 |
| hypothetical protein | CALAB_RS18985 | Not Available | Negative | 4815148 - 4815921 | 30126.7 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | CALAB_RS18990 | Not Available | Negative | 4815921 - 4816814 | 32307.8 |
| ribonuclease y | CALAB_RS18995 | Not Available | Negative | 4816893 - 4818446 | 58650.2 |
| cell division protein zapa | CALAB_RS19000 | Not Available | Negative | 4818696 - 4818983 | 11127.2 |
| cell division protein zapb | CALAB_RS19005 | Not Available | Negative | 4819019 - 4819291 | 10871.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
