Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitase/3-isopropylmalate dehydratase large subunit family protein | CALAB_RS18910 | Not Available | Negative | 4800831 - 4802654 | 65981.1 |
| hd domain-containing protein | CALAB_RS18915 | Not Available | Negative | 4802670 - 4803236 | 21187.9 |
| isocitrate/isopropylmalate dehydrogenase family protein | CALAB_RS18920 | Not Available | Negative | 4803303 - 4804490 | 44016.3 |
| trmb family transcriptional regulator | CALAB_RS18925 | Not Available | Negative | 4804519 - 4805286 | 29760.0 |
| porin | CALAB_RS18930 | Not Available | Negative | 4806014 - 4807030 | 38167.3 |
| duf423 domain-containing protein | CALAB_RS18935 | Not Available | Negative | 4807294 - 4807683 | 13715.0 |
| yfhl family 4fe-4s dicluster ferredoxin | CALAB_RS18940 | Not Available | Negative | 4807885 - 4808133 | 9117.65 |
| dodecin | CALAB_RS18945 | Not Available | Negative | 4808170 - 4808376 | 7724.31 |
| merr family transcriptional regulator | CALAB_RS20515 | Not Available | Negative | 4808466 - 4808876 | 15639.8 |
| hypothetical protein | CALAB_RS18955 | Not Available | Positive | 4809344 - 4809844 | 17288.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
