Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | CALAB_RS18815 | Not Available | Negative | 4770757 - 4772166 | 52730.3 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | CALAB_RS18820 | Not Available | Negative | 4772174 - 4773208 | 36885.9 |
| omph family outer membrane protein | CALAB_RS18825 | Not Available | Negative | 4773220 - 4773753 | 20603.8 |
| outer membrane protein assembly factor bama | CALAB_RS18830 | Not Available | Negative | 4773825 - 4776152 | 88900.9 |
| hypothetical protein | CALAB_RS18835 | Not Available | Negative | 4776167 - 4780321 | 156931.0 |
| (fe-s)-binding protein | CALAB_RS18840 | Not Available | Negative | 4780998 - 4783010 | 75923.9 |
| leucyl aminopeptidase | CALAB_RS18845 | Not Available | Negative | 4783057 - 4784559 | 55580.5 |
| peptide deformylase | CALAB_RS18850 | Not Available | Negative | 4784575 - 4785075 | 18884.8 |
| ribonuclease y | CALAB_RS18855 | Not Available | Negative | 4785436 - 4787025 | 60347.9 |
| is4 family transposase | CALAB_RS18860 | Not Available | Negative | 4787901 - 4790045 | 82393.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
