Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CALAB_RS18765 | Not Available | Negative | 4760266 - 4761087 | 31343.1 |
| single-stranded-dna-specific exonuclease recj | CALAB_RS18770 | Not Available | Negative | 4761080 - 4762792 | 63737.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 4762808 - 4763227 | Not Available |
| zinc ribbon domain-containing protein | CALAB_RS18775 | Not Available | Negative | 4763251 - 4763958 | 27349.8 |
| Trna-met | Not Available | Not Available | Positive | 4764103 - 4764179 | Not Available |
| hypothetical protein | CALAB_RS18785 | Not Available | Negative | 4764228 - 4766435 | 85516.2 |
| rip metalloprotease rsep | CALAB_RS18790 | Not Available | Negative | 4766539 - 4767855 | 48638.1 |
| duf6588 family protein | CALAB_RS18800 | Not Available | Negative | 4768256 - 4769125 | 31052.5 |
| biotin/lipoate a/b protein ligase family protein | CALAB_RS20510 | Not Available | Negative | 4769159 - 4769896 | 28448.2 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | CALAB_RS18810 | Not Available | Negative | 4769964 - 4770746 | 28522.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
