Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate dehydrogenase/oxidase | CALAB_RS18705 | Not Available | Positive | 4749412 - 4750980 | 58057.7 |
| glycerophosphodiester phosphodiesterase family protein | CALAB_RS20500 | Not Available | Positive | 4750984 - 4751856 | 33768.6 |
| duf5320 domain-containing protein | CALAB_RS18715 | Not Available | Positive | 4752102 - 4752341 | 9719.61 |
| lysm peptidoglycan-binding domain-containing protein | CALAB_RS20505 | Not Available | Negative | 4752532 - 4754391 | 72415.0 |
| d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase | CALAB_RS18730 | Not Available | Negative | 4754408 - 4754887 | 18153.0 |
| d-glycero-beta-d-manno-heptose-7-phosphate kinase | CALAB_RS18735 | Not Available | Negative | 4754880 - 4755884 | 36773.4 |
| response regulator | CALAB_RS18745 | Not Available | Negative | 4756203 - 4757768 | 59933.4 |
| hypothetical protein | CALAB_RS18750 | Not Available | Negative | 4757755 - 4758057 | 11610.6 |
| gamma-glutamyltransferase | CALAB_RS18755 | Not Available | Negative | 4758070 - 4759755 | 62371.5 |
| tlpa family protein disulfide reductase | CALAB_RS18760 | Not Available | Negative | 4759758 - 4760288 | 20402.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
