Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type n-terminal cleavage/methylation domain-containing protein | CALAB_RS18655 | Not Available | Negative | 4735932 - 4736354 | 16389.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | CALAB_RS21905 | Not Available | Negative | 4736431 - 4736775 | 12261.0 |
| type ii secretion system f family protein | CALAB_RS18665 | Not Available | Negative | 4736821 - 4738020 | 45177.2 |
| prepilin peptidase | CALAB_RS18670 | Not Available | Negative | 4738041 - 4738808 | 28568.6 |
| atpase, t2ss/t4p/t4ss family | CALAB_RS18675 | Not Available | Negative | 4738816 - 4741320 | 94053.3 |
| phosphoenolpyruvate carboxykinase (atp) | CALAB_RS18680 | Not Available | Negative | 4741794 - 4743635 | 70331.9 |
| pyridoxal phosphate-dependent aminotransferase | CALAB_RS20495 | Not Available | Negative | 4743665 - 4746013 | 88307.8 |
| flotillin family protein | CALAB_RS18690 | Not Available | Negative | 4746047 - 4747447 | 52166.2 |
| hypothetical protein | CALAB_RS18695 | Not Available | Negative | 4748186 - 4748407 | 8171.8 |
| patatin-like phospholipase family protein | CALAB_RS18700 | Not Available | Positive | 4748497 - 4749411 | 33536.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
