Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5666 domain-containing protein | CALAB_RS01600 | Not Available | Positive | 414408 - 416783 | 88855.7 |
| hd-gyp domain-containing protein | CALAB_RS01605 | Not Available | Positive | 416875 - 417564 | 26385.3 |
| hypothetical protein | CALAB_RS01610 | Not Available | Negative | 417554 - 418408 | 32888.5 |
| kelch repeat-containing protein | CALAB_RS19625 | Not Available | Negative | 418314 - 419570 | 46822.5 |
| serine/threonine protein kinase | CALAB_RS19630 | Not Available | Negative | 419625 - 421226 | 60303.4 |
| sigma-54 interaction domain-containing protein | CALAB_RS01625 | Not Available | Negative | 421216 - 422688 | 55250.6 |
| hypothetical protein | CALAB_RS01630 | Not Available | Negative | 422707 - 423663 | 36094.3 |
| pas domain-containing sensor histidine kinase | CALAB_RS01635 | Not Available | Positive | 424471 - 426657 | 82898.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | CALAB_RS01640 | Not Available | Positive | 427151 - 427702 | 21048.6 |
| ferredoxin family protein | CALAB_RS01645 | Not Available | Positive | 427967 - 428224 | 9510.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
