Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i | CALAB_RS18605 | Not Available | Negative | 4720863 - 4722299 | 53852.3 |
| t9ss-dependent choice-of-anchor j family protein | CALAB_RS20490 | Not Available | Negative | 4722399 - 4727372 | 180653.0 |
| hypothetical protein | CALAB_RS18615 | Not Available | Negative | 4727626 - 4729029 | 50114.4 |
| type iv pilus twitching motility protein pilt | CALAB_RS18620 | Not Available | Negative | 4729040 - 4730071 | 38719.2 |
| secretin and tonb n-terminal domain-containing protein | CALAB_RS18625 | Not Available | Negative | 4730080 - 4731381 | 48255.1 |
| hypothetical protein | CALAB_RS18630 | Not Available | Negative | 4731395 - 4731865 | 17903.1 |
| type 4a pilus biogenesis protein pilo | CALAB_RS18635 | Not Available | Negative | 4731867 - 4732406 | 21179.0 |
| hypothetical protein | CALAB_RS18640 | Not Available | Negative | 4732418 - 4734238 | 69801.8 |
| pilus assembly pilx n-terminal domain-containing protein | CALAB_RS18645 | Not Available | Negative | 4734257 - 4735225 | 36835.0 |
| type ii secretion system protein | CALAB_RS18650 | Not Available | Negative | 4735252 - 4735935 | 26158.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
