Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | CALAB_RS18555 | Not Available | Negative | 4708548 - 4709054 | 18986.8 |
| chaperone napd | CALAB_RS18560 | Not Available | Negative | 4709047 - 4709316 | 10064.9 |
| 4fe-4s dicluster domain-containing protein | CALAB_RS21180 | Not Available | Negative | 4709329 - 4709883 | 20098.3 |
| molybdopterin oxidoreductase family protein | CALAB_RS18570 | Not Available | Negative | 4709976 - 4712249 | 84699.4 |
| hypothetical protein | CALAB_RS18575 | Not Available | Negative | 4712277 - 4712654 | 13641.3 |
| alginate export family protein | CALAB_RS18580 | Not Available | Negative | 4712705 - 4714168 | 54931.0 |
| atp-binding protein | CALAB_RS18585 | Not Available | Positive | 4714420 - 4716315 | 72863.6 |
| sigma-54-dependent transcriptional regulator | CALAB_RS18590 | Not Available | Positive | 4716330 - 4717739 | 53662.7 |
| n-acetylmannosamine-6-phosphate 2-epimerase | CALAB_RS18595 | Not Available | Negative | 4717736 - 4718443 | 25793.5 |
| gh36-type glycosyl hydrolase domain-containing protein | CALAB_RS18600 | Not Available | Negative | 4718446 - 4720866 | 92576.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
